PDB entry 1efn



Warnings!

Structure
SpacegroupP 65 2 2
Cell dimensionsa: 107.800 Åb: 107.800 Åc: 229.100 Å
α: 90.00°β: 90.00°γ: 120.00°
Resolution2.50 Å

Experimental data
ReflectionsAll: 25370Test set: 0 (0.0%)
Resolution range19.91 Å2.50 Å

R-values etc.
From PDB headerCalculated from dataAfter conservative optimisationAfter full optimisation
R0.21500.23740.19850.1939
R-free0.28200.22710.21710.2141
σR-free 0.00640.00610.0060
Z(R-free) 10.084.384.00

WHAT_CHECK validation
Original PDB entryConservatively optimisedFully optimised
1st generation packing quality1-1.068-0.867-0.692
2nd generation packing quality1-0.0380.1420.785
Ramachandran plot appearance1-2.344-0.369-0.066
Chi-1/Chi-2 rotamer normality1-2.723-1.403-0.861
Backbone conformation1-0.506-0.440-0.319
Bond length RMS Z-score20.4320.6410.617
Bond angle RMS Z-score20.7390.8200.803
Total number of bumps3562114
Unsatisfied H-bond donors/acceptors3212218
LinkLinkLink

1 Higher is better, 2 Should be lower than 1.000, 3 Fewer is better


Density map fit (real-space correlation coefficient)
Significantly improved residues137
Significantly deteriorated residues0
Changes of all residuesPlot

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