PDB entry 2j6f


SpacegroupI 4 2 2
Cell dimensionsa: 66.510 Åb: 66.510 Åc: 67.779 Å
α: 90.00°β: 90.00°γ: 90.00°
Resolution1.70 Å

Experimental data
ReflectionsAll: 8557Test set: 0 (0.0%)
Resolution range19.32 Å1.70 Å

R-values etc.
From PDB headerCalculated from dataAfter conservative optimisationAfter full optimisation
σR-free 0.00650.00750.0077
R-free Z-score 5.883.072.64

WHAT_CHECK validation
Original PDB entryConservatively optimisedFully optimised
1st generation packing quality1-1.667-1.595-1.638
2nd generation packing quality11.5341.6111.812
Ramachandran plot appearance11.0301.2271.179
Chi-1/Chi-2 rotamer normality13.5563.0753.872
Backbone conformation10.7750.8650.808
Bond length RMS Z-score20.5380.3420.354
Bond angle RMS Z-score20.6820.5970.609
Total number of bumps3553
Unsatisfied H-bond donors/acceptors3244
Full WHAT_CHECK reportsLink LinkLink

1 Higher is better
2 Should be lower than 1.000
3 Fewer is better

Electron density map validation
Real-space correlation coefficientReal-space R-factor
Significantly improved residues48
Significantly deteriorated residues14
Changes of all residuesPlot Plot