WHAT_CHECK validation
| Original PDB entry | Re-refined (only) | Re-refined and rebuilt |
1st generation packing quality1 | -0.107 | -0.176 | -0.179 |
2nd generation packing quality1 | 2.001 | 1.993 | 1.997 |
Ramachandran plot appearance1 | -0.418 | -0.222 | -0.202 |
Chi-1/Chi-2 rotamer normality1 | 1.088 | 1.303 | 1.466 |
Backbone conformation1 | 1.100 | 1.109 | 1.106 |
Bond length RMS Z-score2 | 0.486 | 0.766 | 0.762 |
Bond angle RMS Z-score2 | 0.795 | 0.893 | 0.886 |
Total number of bumps3 | 0 | 0 | 0 |
Unsatisfied H-bond donors/acceptors3 | 2 | 2 | 2 |
| Link | Link | Link |
1 Higher is better, 2 Should be lower than 1.000, 3 Fewer is better