PDB entry 1lo5


SpacegroupP 21 21 21
Cell dimensionsa: 52.008 Åb: 75.792 Åc: 198.082 Å
α: 90.00°β: 90.00°γ: 90.00°
Resolution3.20 Å

Experimental data
ReflectionsAll: 12307Test set: 1005 (8.2%)
Resolution range10.00 Å3.20 Å

R-values etc.
From PDB headerCalculated from dataAfter conservative optimisationAfter full optimisation
σR-free 0.00750.00700.0069
R-free Z-score -5.070.871.04

WHAT_CHECK validation
Original PDB entryConservatively optimisedFully optimised
1st generation packing quality1-1.536-1.278-1.220
2nd generation packing quality1-2.445-2.201-2.142
Ramachandran plot appearance1-5.638-4.488-4.159
Chi-1/Chi-2 rotamer normality1-4.257-3.203-2.862
Backbone conformation1-0.608-0.205-0.047
Bond length RMS Z-score20.3910.2730.272
Bond angle RMS Z-score20.7490.5240.515
Total number of bumps32707049
Unsatisfied H-bond donors/acceptors3928181
Full WHAT_CHECK reportsLink LinkLink

1 Higher is better
2 Should be lower than 1.000
3 Fewer is better

Electron density map validation
Real-space correlation coefficientReal-space R-factor
Significantly improved residues00
Significantly deteriorated residues1025
Changes of all residuesPlot Plot