WHAT_CHECK validation
| Original PDB entry | Re-refined (only) | Re-refined and rebuilt |
1st generation packing quality1 | -0.123 | -0.186 | -0.129 |
2nd generation packing quality1 | -0.764 | -0.694 | 0.147 |
Ramachandran plot appearance1 | -0.242 | 0.111 | 0.016 |
Chi-1/Chi-2 rotamer normality1 | -0.046 | 0.052 | -0.369 |
Backbone conformation1 | -0.489 | -0.550 | -0.605 |
Bond length RMS Z-score2 | 0.313 | 0.362 | 0.362 |
Bond angle RMS Z-score2 | 0.560 | 0.632 | 0.645 |
Total number of bumps3 | 34 | 18 | 18 |
Unsatisfied H-bond donors/acceptors3 | 7 | 6 | 6 |
| Link | Link | Link |
1 Higher is better, 2 Should be lower than 1.000, 3 Fewer is better