Optimised PDB entry 1oey



Warnings!

Structure
SpacegroupP 64
Cell dimensionsa: 151.422 Åb: 151.422 Åc: 68.317 Å
α: 90.00°β: 90.00°γ: 120.00°
Resolution2.00 Å

Experimental data
ReflectionsAll: 51140Test set: 0 (0.0%)
Resolution range24.90 Å2.00 Å

R-values etc.
From PDB headerCalculated from dataAfter re-refinementAfter re-refinement and rebuilding
R0.21000.20800.18080.1783
R-free0.25200.19870.21020.2115
σR-free 0.00390.00410.0041
Z(R-free) 15.954.052.95

WHAT_CHECK validation
Original PDB entryRe-refined (only)Re-refined and rebuilt
1st generation packing quality1-0.634-0.512-0.439
2nd generation packing quality1-1.875-1.867-1.723
Ramachandran plot appearance10.2371.0911.118
Chi-1/Chi-2 rotamer normality1-3.179-2.652-2.425
Backbone conformation10.5740.6540.728
Bond length RMS Z-score20.5380.8720.853
Bond angle RMS Z-score20.7470.9950.955
Total number of bumps3272938
Unsatisfied H-bond donors/acceptors3636154
LinkLinkLink

1 Higher is better, 2 Should be lower than 1.000, 3 Fewer is better


Density map fit (real-space correlation coefficient)
Significantly improved residues244
Significantly deteriorated residues1
Changes of all residuesPlot

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