The genomes of
were screened for the protein families in the
database using HMM searches.
For every protein family, all the homologous genes in the investigated
species are listed.
For every gene,
provides information about the following:
the domain and reliability of the
prediction is given
the gene was assigned to a cluster of orthologous groups of
proteins from the
database if the first three BLAST hits were consistent;
the domain is given, as well as the COG name and functional category
if a COG was assigned, it was submitted to a
search to identify orthologous groups (COGs and NOGs, see
that were genomically linked to the query gene;
scores for neighborhood, fusion and co-occurrence in genomes are
the amino acid sequence of the gene is provided
buttons are included to directly submit the sequence to a
genomic context search, or a
domain architecture search
You can always click on an identifier to link to more information in
one of the source databases.
© Bas E. Dutilh 2002